Pathobiology of thymic epithelial tumours and the treatment strategy based on immuno-oncological characteristics: a narrative review
Review Article

Pathobiology of thymic epithelial tumours and the treatment strategy based on immuno-oncological characteristics: a narrative review

Satoru Okada ORCID logo, Shunta Ishihara ORCID logo, Tatsuo Furuya ORCID logo, Chiaki Nakazono ORCID logo, Masayoshi Inoue ORCID logo

Division of Thoracic Surgery, Department of Surgery, Kyoto Prefectural University of Medicine, Graduate School of Medical Sciences, Kyoto, Japan

Contributions: (I) Conception and design: M Inoue; (II) Administrative support: S Okada, M Inoue; (III) Provision of study materials or patients: All authors; (IV) Collection and assembly of data: All authors; (V) Data analysis and interpretation: All authors; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors.

Correspondence to: Masayoshi Inoue, MD, PhD. Division of Thoracic Surgery, Department of Surgery, Kyoto Prefectural University of Medicine, Graduate School of Medical Sciences, Kajii-cho 465, Kamigyo-Ku, Kyoto 602-8566, Japan. Email: mainoue@koto.kpu-m.ac.jp.

Background and Objective: Thymic epithelial tumours (TETs), including thymomas and thymic carcinomas, are relatively rare anterior mediastinal malignancies. Thymomas are well known to be associated with various autoimmune diseases, such as myasthenia gravis (MG), pure red cell aplasia, and hypogammaglobulinemia. The mainstay of treatment for all TETs is complete surgical resection, although recent advances in irradiation and anti-tumour drug therapies are increasingly indicated for advanced or recurrent disease. The pathobiology of TETs was reviewed to consider optimal treatment strategies based on their immuno-oncological characteristics.

Methods: A comprehensive literature search was conducted using PubMed, focusing on the biology and treatment of TETs, along with integration of our original research data.

Key Content and Findings: Pathobiology is different between thymoma and thymic carcinoma. Incomplete T cell development is observed in thymoma, which may affect patient autoimmunity. Type AB, B1, and B2 thymomas harbour abundant immature T cells, which cannot act as effector T cells in treatment using immune checkpoint inhibitors (ICIs). Neoplastic thymic epithelial cells (TECs) express programmed cell death-ligand 1 (PD-L1) at varying levels, and frequent genetic aberrations are observed according to the World Health Organization (WHO) classification. Germinal centre formation in the surrounding thymus may have a clinical role in thymoma-associated MG. Regarding treatment strategies, radical minimally invasive thymectomy using robotic technology is now available for MG. Effective molecular-targeted and ICI therapies have recently been introduced, and further novel targeted therapies are currently under development. WHO histological subtypes and inflammatory biomarkers are practically useful for determining the treatment strategy.

Conclusions: A fundamental understanding of pathobiology and immuno-oncology is crucial for the appropriate management of TETs.

Keywords: Thymic epithelial tumour (TET); autoimmunity; T cell development; minimally invasive surgery; immune checkpoint inhibitors (ICIs)


Received: 09 December 2025; Accepted: 13 February 2026; Published online: 09 June 2026.

doi: 10.21037/med-2025-1-72


Introduction

Thymic epithelial tumours (TETs) are relatively rare mediastinal tumours and include thymomas and thymic carcinomas (1). Thymomas exhibit a variety of histopathological findings that depend on the morphology of the tumour epithelial cells and the quantity of lymphocytes they contain. They are subclassified into types A, AB, B1, B2, and B3 according to the World Health Organization (WHO) classification (1). Most thymic carcinomas are squamous cell carcinomas. Thymic neuroendocrine tumours were previously classified as TETs and were often diagnosed as thoracic carcinoid tumours. Thymomas can be associated with various autoimmune diseases, such as myasthenia gravis (MG), pure red cell aplasia, and hypogammaglobulinemia (2,3). Cases of thymoma with positive anti-acetylcholine receptor (AChR) antibodies without MG and cases of MG developing after thymectomy have also been reported (4). However, the autoimmunogenicity of thymoma and the mechanisms underlying its association with autoimmune diseases remain unclear. In recent years, the development of immune checkpoint inhibitors (ICIs) for malignant tumours has been important, and clinical trials are also being conducted for thymic tumours (5,6). Since many thymomas are autoimmunogenic and often contain abundant lymphocytes within the tumour, the use of ICIs, which inherently carry the risk of autoimmune disease as an adverse event, requires careful consideration of the pathology of thymomas.

Thymic carcinomas, unlike thymomas, rarely present with autoimmune complications, and their treatment can be considered similar to that of other solid tumours. Recent clinical trials have demonstrated the efficacy of molecular targeted therapy using multi-kinase inhibitors and combined chemoimmunotherapy (7,8), thereby increasing the number of available treatment options.

The curative treatment for TETs is complete surgical resection. Recent advancements in minimally invasive surgery have been important, and technological innovations such as robotic-assisted surgery have provided substantial benefits to patients (9-11).

This review discusses the pathogenesis of thymoma and thymic carcinoma, which is considerably more complex than that of other cancers, and examines the treatment of these TETs based on a fundamental understanding of their immunopathology. We present this article in accordance with the Narrative Review reporting checklist (available at https://med.amegroups.com/article/view/10.21037/med-2025-1-72/rc).


Methods

A thorough search of the PubMed database was conducted for studies regarding the biology of TETs using a combination of the following terms: “thymoma”, “thymic carcinoma”, “myasthenia gravis”, “autoimmunity”, “T cell development”, “PD-L1”, “Transforming growth factor-β (TGF-β)”, “germinal centre”, “robotic surgery”, “immune check point inhibitor”, “molecular target”, and “biomarker”. Only articles in English were included in the present review (Table 1).

Table 1

The search strategy summary

Items Specification
Date of search August 10, 2025–November 30, 2025
Database searched PubMed
Search terms used “Thymoma”, “thymic carcinoma”, “myasthenia gravis”, “autoimmunity”, “T cell development”, “PD-L1”, “Transforming growth factor-β (TGF-β)”, “germinal centre”, “robotic surgery”, “immune check point inhibitor”, “molecular target”, “biomarker”
Timeframe Up to November 12, 2025
Inclusion criteria All English language articles, including original full-length articles, and case reports were included
Selection process All articles are selected by all coauthors

Pathobiology of TETs

T cell development in thymoma and its autoimmunogenicity

Thymomas are well known to be frequently associated with abundant immature T cells, which are similar to developing thymocytes in the normal infant thymus, namely CD4+CD8+ double-positive T cells (12,13). Such immature T cells are observed even in pleural or distant metastatic sites in thymoma patients (14), indicating potential T cell development within thymomas, supported by the functional neoplastic thymic epithelial cells (TECs). We previously showed T-cell maturation from CD3CD4CD8 immature T cells into CD4+CD8+ T cells via CD3CD4+CD8 cells with in vitro reaggregation culture using isolated CD34+CD3CD4CD8 T cell progenitors and primary culture neoplastic TECs (15). There is also variability in major histocompatibility complex (MHC) class II expression on neoplastic TECs, which plays a key role in normal T cell selection in the thymus, and the expression level is correlated with the degree of T-cell maturation (16). Such an alteration in the function of neoplastic TECs as stroma in the thymic environment could affect the positive and negative T cell selections in thymoma and might cause various autoimmune diseases, including MG. We propose the affinity/avidity model of the thymoma microenvironment, which could be the basic potential mechanism for its autoimmune comorbidities (Figure 1). Moderate impairment of MHC class II expression could induce inappropriate selection of autoreactive T cells, causing autoimmune diseases, whereas TECs with severe MHC class II downregulation can show neither the activity of T cell selection nor autoimmune behaviours.

Figure 1 Auto-immunogenicity of thymoma on the affinity/avidity model for T cell selection in the thymus. TCR-MHC, T cell receptor-major histocompatibility complex.

T cell characteristics in thymoma by WHO histological type

T cells within thymomas exhibit characteristic patterns that depend on the histological subtype. We previously reported that, in AB, B1, and B2 thymomas, the T-cell population is predominantly composed of CD4+CD8+ double-positive cells, similar to those observed in the normal thymus, whereas in type A and B3 thymomas, the proportion of CD4+CD8+ cells is low (17). Furthermore, we demonstrated that the amounts of T-cell receptor excision circles (TRECs), which can be detected in newly formed naïve T cells in the thymus, in CD4 and CD8 single-positive T cells are significantly higher in AB, B1, and B2 thymomas than in type A and B3 thymomas, and comparable to the normal thymus. Although CD8+ T cells are the main targets of ICIs, most intratumoral CD8+ T cells in AB, B1, and B2 thymomas appear to be thymocytes that have matured within the tumour, rather than tumour-infiltrating T cells. These results suggest a limited potential efficacy of immunotherapy in AB, B1, and B2 thymomas. Yamamoto et al. analysed T cells within thymomas and thymic carcinomas using flow cytometry and reported that type B3 thymomas and thymic carcinomas belonged to the “hot cluster”, characterized by prominent expression of Tim-3 and CD103 in CD4 and CD8 single-positive T cells. They also reported that marked enhancements in cytokine secretion and cytotoxicity induced by T cells on exposure to an anti-programmed cell death-1 (anti-PD-1) antibody were particularly evident in type B3 thymomas and thymic carcinomas (18,19). These findings suggest the potential utility of immunotherapeutic approaches for patients with type B3 thymomas and thymic carcinomas.

Molecular pathology of TETs

The molecular basis and pathogenesis of TETs remain uncertain due to the rarity of this disorder, and the associated abundant non-neoplastic T cells have complicated bulk molecular analyses in thymoma. Genetic alteration in TETs is unique compared with other malignancies. The GTF2I gene, a multifunctional phosphoprotein with roles in transcription and signal transduction, is found as a footprint in WHO type A and AB thymomas (20,21). Regarding potential tumour suppressor genes, chromosome 6 harbours frequent genetic aberrations, mainly loss of heterozygosity (LOH), detected with microsatellite analyses; these aberrations tend to increase according to the malignant characteristics of TETs (22,23). We found the genetic spectrum from low-grade thymoma to thymic carcinoma via high-grade thymoma in TETs. These results might suggest the molecular sequences against the distinct immunological differences between thymoma and thymic carcinoma. Interestingly, the HLA-DP, DQ, and DR loci are located on chromosome 6p.21.3. In addition, a unique KMT2A-MAML2 translocation is found in WHO type B2 and B3 thymomas, and YAP1-MAML2 translocation is found in metaplastic thymoma, which is a rare histological subtype of low-grade thymoma (24). A lack of medullary autoimmune regulator gene (AIRE) expression has been reported in thymoma, though its influence on the pathogenesis of autoimmune comorbidities remains unclear (25,26).

Programmed cell death-ligand 1 (PD-L1) expression on TETs

The evaluation of PD-L1 expression in TETs involves considerable complexity, with wide-ranging findings. PD-L1, the ligand for PD-1, is a key mediator of tumour immune evasion and is expressed on tumour cells. Because tumours exploit this pathway to escape attack by tumour-infiltrating lymphocytes (TILs), PD-L1-positive tumours are theoretically more capable of evading host immunity (27). Similarly, high-grade histological subtypes of TETs may express PD-L1 as part of their immune evasion strategy. However, since TETs arise from thymic epithelial tissue, interpretation of PD-L1 expression is complicated by the thymus’s own expression patterns: thymocytes express PD-1 during multiple maturation stages, and TETs regulate positive selection via PD-L1 and programmed cell death-ligand 2 (PD-L2) (28). PD-L1 is expressed broadly throughout the thymus, whereas PD-L2 expression is largely restricted to the medulla (29). In the normal thymus, PD-L1 expression can be detected from early life (Figure 2), and it may persist even after thymic involution (30). Thymomas have been reported to show higher PD-L1 expression rates than many other tumour types (31), likely reflecting their origin in the thymic epithelium.

Figure 2 Immunohistochemical staining for PD-L1 expression in the infant thymus at (A) low-power magnification (×100) and (B) high-power magnification (×400). PD-L1, programmed death-ligand 1.

Thymomas encompass diverse histological subtypes and exhibit considerable variability in PD-L1 expression. They are classified into low-grade Types A, AB, and B1, and the more aggressive B2 and B3 subtypes. Distinct PD-L1 expression profiles have been reported across these subtypes (30,32-37). Our data similarly demonstrated characteristic expression patterns (36). Specifically, PD-L1 expression was low in Type A/AB thymomas and high in Type B thymomas, findings largely consistent with previous reports. However, results regarding thymic carcinomas are less consistent. Several studies have reported higher PD-L1 expression in thymic carcinomas than in thymomas (38,39), whereas others have found the opposite results (30,32,33,35,36). This discrepancy likely reflects the marked histological heterogeneity of thymomas, differences in antibody specificity, and variable sample sizes. Notably, studies directly comparing Type B3 thymomas and thymic carcinoma demonstrated significantly higher PD-L1 expression in B3 thymomas. This conclusion was consistent across four antibody clones (40).

Several studies have investigated molecular mechanisms underlying PD-L1 expression in TETs. Umemura et al. reported that loss of CYLD function enhances IFN-γ-dependent PD-L1 expression via the STAT1/IRF1 axis, whereas tumour necrosis factor alpha (TNF-α) can induce PD-L1 independently of the NF-κB pathway (41). Arbour et al. found a significant association between high PD-1 expression and moderate to high levels of glucocorticoid-inducible tumour necrosis factor receptor (GITR) in high-grade TETs (42). Moreover, HDAC, a proposed prognostic factor in TETs, has been shown by immunohistochemistry to correlate positively with PD-L1 expression (43). PD-L1 expression has also been linked to epithelial-mesenchymal transition (EMT)-related markers, suggesting a potential role in predicting progression-free survival (PFS) (44).

Associations between PD-L1 expression and clinicopathologic features in TETs remain inconsistent. Regarding disease stage, several studies reported significant associations with advanced Masaoka-Koga (32,34,38,39) or Masaoka stages (33,45), whereas others found no correlations (36,44,46,47). With respect to age or sex, most studies found no associations with PD-L1 expression (32,33,35,36,39). Regarding MG comorbidity, most reports similarly found no association, though a few identified a positive correlation (35). Given that PD-L1 is highly expressed in Type B thymomas, which also show higher rates of MG, this relationship may be driven by the histological subtype. Several studies have also described increased PD-L1 expression following chemotherapy (32,44,46,48). Katsuya et al. reported that chemotherapy-induced immunogenic cell death activates dendritic cells, leading to T-cell stimulation and interferon-gamma (IFN-γ) production, which in turn induces PD-L1 expression on tumour cells (48).

The prognostic impact of PD-L1 expression in TETs is likewise controversial. Some studies have reported an association between high PD-L1 expression and a poor prognosis (36,37,45), whereas other research has linked high PD-L1 expression to good outcomes (42,49). Several other studies found no clear prognostic impact (34,38,39,46,47,50). In contrast, clinical trials have consistently shown that higher PD-L1 expression is associated with improved responses to ICIs, regardless of whether the tumour is a thymoma or thymic carcinoma (5,19,51). Collectively, these data support PD-L1 as a useful predictive biomarker for immunotherapy in TETs.

TGF-β as a biomarker in TETs

TGF-β is a pleiotropic cytokine with complex roles in tumour biology. Although it can function as a tumour suppressor in early oncogenesis, in established cancers, TGF-β often promotes the EMT, invasion, angiogenesis, and immunosuppression (52). It also modulates immune responses, fostering an immunosuppressive tumour microenvironment (53). However, the significance of TGF-β in TETs remains incompletely understood.

A recent study was the first to evaluate the clinical and biological significance of TGF-β1 expression in resected TETs (54). Immunohistochemical analysis showed high intratumoural TGF-β1 expression in 28.3% of cases, including 15.4% of thymic carcinomas and 30.4% of thymomas. Although no clear correlation with WHO histological subtype was observed, 70% of TETs with advanced Masaoka stage (III/IV) exhibited high TGF-β1 levels. Clinically, 5-year freedom from recurrence (FFR) was 95.1% in the low TGF-β1 expression group vs. only 58.1% in the high-expression group. Notably, high co-expression of TGF-β1 and PD-L1 conferred an even worse prognosis (5-year FFR 46.1%), and this combined expression emerged as an independent predictor of recurrence. Mechanistically, the same study demonstrated a positive correlation between intratumoral TGF-β1, phosphorylated Smad2/3, and PD-L1 on immunohistochemistry. In vitro, treatment of a thymic carcinoma cell line (55) with recombinant TGF-β1 induced a dose-dependent upregulation of PD-L1 mRNA and protein, accompanied by increased Smad2/3 phosphorylation. This is consistent with reports in human lung cancer cells showing that TGF-β1 upregulates PD-L1 via a Smad2-dependent mechanism (56). Taken together, these findings suggest that TGF-β1 drives immune evasion in TETs by enhancing PD-L1 expression through Smad signalling. Furthermore, patients whose tumours co-express high TGF-β1 and PD-L1 appear to be at higher risk of recurrence and might benefit from combined TGF-β/PD-L1 blockade.

Aside from the above, only one other study has examined TGF-β in unresectable advanced TET and demonstrated that a significantly higher proportion of thymic carcinomas (65.0%) exhibit high TGF-β1 expression compared with invasive thymomas (15.4%) (57). Moreover, in advanced disease, high TGF-β1 expression was associated with shorter median overall survival (29.5 vs. 62.9 months). Together with the findings in resectable tumours, this suggests that TGF-β1 is a predictor of a poor prognosis across all stages of TET, underscoring its critical role in tumour progression and recurrence. The difference between thymoma and thymic carcinoma for TGF-β expression is further topic to be solved.

From a therapeutic standpoint, targeting TGF-β has attracted considerable interest. One example is bintrafusp alfa (M7824), a bifunctional fusion protein that combines an anti-PD-L1 antibody with the extracellular domain of TGF-β receptor II. This agent is currently being evaluated in a phase II trial for relapsed TET (NCT04417660) (58). Early evidence suggests that dual TGF-β/PD-L1 blockade can overcome TGF-β-mediated immunosuppression and thereby enhance the efficacy of checkpoint inhibition. Furthermore, emerging evidence highlights the role of TGF-β in shaping the tumour microenvironment, notably by promoting angiogenesis and activating cancer-associated fibroblasts (CAFs) (52). Overall, these observations might support the view that TGF-β not only contributes to immune evasion, but also fosters a pro-tumorigenic mesenchymal microenvironment, underscoring its potential as both a biomarker and a therapeutic target. However, the clinical role of TGF-β has not been addressed in TETs. Further research would be warranted.

Germinal centre (GC) formation in TETs, surrounding thymus, and extrathymic tissue with MG potential

In MG, an association with abnormal thymic pathology has long been recognized. Anti-AChR antibodies have been reported to be produced in MG-associated hyperplastic thymuses in vitro (59). Ectopic GCs are often formed in the thymus of patients with anti-AChR antibody-positive MG, and thymic hyperplasia with ectopic GCs is observed in approximately 50–60% of patients with anti-AChR antibody-positive MG (60). GC is a specialized microenvironment in which activated B cells can mutate B cell receptors and undergo affinity maturation (61,62). In MG, ectopic GCs are thought to play an important role in the production of high-affinity anti-AChR antibodies. Ectopic GCs in the thymus typically form in the medulla, where AChR antigen-expressing mTECs and myoid cells are present and believed to trigger autoimmune responses leading to GC formation (63,64). It has been reported that the number of GCs correlates with anti-AChR antibody titres (65-67). In thymomas, we previously reported that ectopic GCs are more frequently observed in the medulla of the residual thymus in anti-AChR antibody-positive cases than in antibody-negative cases (60.7% vs. 9.8%) (65). Within the antibody-positive cases, GCs were significantly more frequently observed in younger patients and in thymuses with less involution. The loss of medullary structure associated with thymic involution may lead to a reduction in cells essential for GC formation, such as AChR antigen-expressing myoid cells, thereby hindering GC development. A randomized trial of thymectomy for MG without thymoma showed that thymectomy was not effective in patients over 50 years of age (68). This result suggests that resection of an age-related involuted thymus may not be therapeutically beneficial, and it raises the question of whether the extent of thymectomy should also be reconsidered in elderly patients with MG-associated thymoma.

Not only the adjacent thymus, but also the thymoma itself may contribute to the pathogenic process leading to anti-AChR antibody production. In the normal thymus, self-reactive T cells are excluded by negative selection in the thymic medulla and corticomedullary junction. In thymomas, T-cell maturation occurs similarly to the normal thymus; however, because of the reduced medullary architecture and the consequent absence of medullary TECs (mTECs) expressing autoimmune regulator (AIRE) and regulatory T cells (Tregs), self-reactive T cells are thought to survive without being eliminated (64,69). T cells that mature within thymomas exit to the peripheral blood and alter the peripheral T-cell repertoire by thymoma-derived autoreactive T-cells (70). Furthermore, recently, a population of neuromuscular antigen-expressing mTECs (nmTECs) has been identified within thymomas associated with MG, and these cells are believed to promote the generation of pathogenic autoantibodies (71). These findings suggest that disease mechanisms intrinsic to the tumour, independent of the adjacent thymus, may also exist. The immunological influence of thymectomy has been discussed with the risk of second malignancy and survival outcome (72,73). The negative impact of total thymectomy on postoperative outcome is still controversial. We should carefully consider the necessity of total thymectomy based on the pathological evidence and reported clinical outcomes with the risk of second malignancy. This issue should be investigated as a future challenge.


Management of TETs

Immunotherapy for TETs

In clinical trial reports of ICI therapy for TETs, Rajan et al. conducted a phase I trial of the anti-PD-L1 antibody avelumab in seven patients with relapsed thymoma (B1, n=1; B2, n=3; B3, n=3) and one patient with thymic carcinoma, all of whom had received at least one prior standard therapy (19). Confirmed partial responses were observed in 2 of 7 thymoma cases (B1, n=1; B3, n=1), whereas the patient with thymic carcinoma achieved stable disease. Grade ≥3 immune-related adverse events (irAEs) occurred in 5 of 8 patients (62.5%). Cho et al. reported a single-centre phase II study of the anti-PD-1 antibody pembrolizumab in 26 patients with thymic carcinoma and 7 patients with thymoma (B2, n=4; B2/3, n=3; B3, n=2) whose disease had progressed following at least one line of platinum-based chemotherapy (5). In this study, the overall response rate was 28.6% for thymomas and 19.2% for thymic carcinomas. Pembrolizumab was discontinued due to grade 3 or 4 irAEs in 5 patients with thymoma (71.4%) and 3 patients with thymic carcinoma (11.5%). A meta-analysis including 6 clinical trials summarized the ICI management in TETs with its significant higher risk of irAE in thymoma (74). Recently, the promising results of combined chemo-ICI regimens using carboplatin, paclitaxel and atezolizumab for thymic carcinoma was reported (6). These findings indicate that ICIs may induce irAEs at a high frequency in thymoma, not in thymic carcinoma, warranting careful consideration.

Immunological philosophy of robotic subxiphoid-optical thymectomy as a current standard minimally invasive surgery

The extent of thymus resection in treating TETs has long been a subject of discussion. Historically, the advantage of extended thymectomy (ET), which involves the en bloc resection of extracapsular fat tissue, was reported in patients with non-thymomatous MG (75). Based on this rationale, ET has been indicated for not only thymomatous MG patients, but also for patients with non-MG thymoma who test positive for anti-AChR antibodies, often at the institution’s or physician’s discretion. In the era preceding minimally invasive surgery, there was little debate regarding the extent of thymus resection, whether total or partial, in TETs, since the technical burden of total or ET via median sternotomy was limited. However, with the advent of thoracoscopic minimally invasive surgery, a significant difference in technical difficulty and operative duration became apparent between total and partial thymectomy (76). Subsequently, the introduction of robotic surgery has narrowed the technical gap between total and partial resection, leading to a shrinking discussion about the feasibility of partial resection. Notably, the surgical view and manipulation offered by robotic trans-subxiphoid thymectomy are similar or superior to those of conventional trans-sternal thymectomy (9,77). Furthermore, a high density of GCs in the cervical region has been reported in patients with MG (78). Although the cervical region remains technically challenging to access via conventional thoracoscopy, the use of multi-jointed robotic instruments facilitates more precise dissection. Consequently, robotic trans-subxiphoid thymectomy may offer a biological advantage in the surgical management of MG.

Inflammatory biomarkers in TETs

Systemic inflammation promotes tumour progression and is recognised as a hallmark of cancer (79). In TETs, the systemic inflammatory status can be evaluated using routine blood-based markers. In a study analysing perioperative peripheral blood parameters in resectable TETs, elevated preoperative leukocyte, neutrophil, and platelet counts were associated with significantly worse relapse-free survival, suggesting a positive association between the systemic inflammatory response and tumour progression (80). Of these markers, the neutrophil count (cut-off 4,450/µL) showed the strongest prognostic impact. Five-year relapse-free survival was 63.8% in the high-neutrophil group vs. 96.8% in the low-neutrophil group, and it also remained independently predictive. A composite risk score incorporating neutrophil count, stage, and histology improved prognostic stratification. Notably, neutrophil counts decreased after surgery, but rose again at tumour recurrence, indicating their potential utility as a dynamic tumour marker.

A high preoperative neutrophil-to-lymphocyte ratio (NLR) (cut-off 2.27) has also been linked to inferior survival, with particularly pronounced effects in tumour-node-metastasis (TNM) stage III thymoma, where disease-free survival was 0% vs. 66% in the low-NLR group (81). In a separate evaluation of multiple inflammatory indices, the NLR and platelet-to-lymphocyte ratio (PLR) demonstrated predictive value on receiver-operating characteristic (ROC) curve analysis, although only NLR remained significant on logistic regression; fibrinogen correlated with stage, but was not independently prognostic (82). In addition, an elevated C-reactive protein (CRP >1 mg/dL) was more frequently observed in thymic carcinoma and neuroendocrine tumours, whereas high lactate dehydrogenase (LDH >240 U/L) was associated with poorer disease-specific survival in thymic carcinoma (83). In thymic carcinoma, NLR, regardless of being analysed as a continuous variable or as a categorical measure (highest quartile >4.1), was significantly associated with recurrence and overall survival, whereas PLR and absolute neutrophil counts were not (84). These findings underscore the importance of histology-specific interpretation when applying inflammatory biomarkers to TETs.

Although tumour stage remains the dominant prognostic factor, available evidence indicates that elevated neutrophil counts, high NLR, and increased CRP and LDH levels reflect a protumour inflammatory milieu and may refine prognostic assessment of TETs. Prospective validation, assessment of dynamic biomarker changes, and studies exploring anti-inflammatory or immunomodulatory therapeutic approaches are warranted. In addition, the biological significance of inflammatory findings might be somewhat different with other malignancies, because of the autoimmunogenicity of TETs. In fact, clinical or preclinical inflammatory responses have been described in non-thymomatous MG patients (85). Thus, we have to understand the results with careful interpretation based on the immunological characteristics of TETs.

Immunoproteasome (IP) inhibition as a novel target therapy for TETs

The 26S proteasome is an ATP-dependent macromolecular protease that recognises ubiquitin-tagged substrates and orchestrates their degradation, thereby maintaining protein homeostasis and regulating processes such as cell-cycle progression, DNA replication, transcription, and stress responses (86). Three types of proteasome are recognised: the constitutive proteasome (CP), which mediates general protein turnover; the IP, whose inducible β1i, β2i, and β5i subunits are upregulated by interferon-γ and specialise in generating peptides for major histocompatibility complex class-I presentation (87); and the thymoproteasome (TP), which contains the β5t subunit encoded by PSMB11 and is expressed uniquely in cortical TECs to enable positive selection of CD8+ T cells (88). Upregulation of proteasome activity is a common feature of malignancies; IP subunits, particularly β5i (PSMB8), influence tumour antigenicity and micro-environmental interactions and have been linked to a poor prognosis in several cancers (87). Although β5t is used as a cortical marker in TETs (89), the significance of CP and IP expressions in TETs has been unclear.

A recent study addressed this gap by profiling proteasome expression and drug sensitivity in TETs (90). A chemical screen of 120 agents identified carfilzomib, an irreversible CP/IP inhibitor, as one of the most potent compounds against thymic carcinoma cell lines (55,91). Immunohistochemical analysis of 138 tumours showed heterogeneous UPS expression; high levels of PSMB5 (β5c) and PSMB8 (β5i) were enriched in advanced-stage disease and correlated with shorter PFS. Carfilzomib induced caspase-dependent apoptosis, endoplasmic-reticulum stress, and autophagy. Low-dose carfilzomib synergised strongly with BCL-2 family inhibitors, which have recently been proven to be strong inducers of apoptosis and emerged as novel therapeutic agents for thymic carcinoma (92), to enhance cell death. Mechanistic studies demonstrated that carfilzomib inhibits both CP and IP activities while sparing TP; interferon-γ upregulated PSMB8, enhancing drug sensitivity, whereas silencing PSMB8 or PSMB10 reduced sensitivity. Thymic squamous cell carcinomas showed characteristically higher PSMB8 expression than squamous carcinomas of the lung or head and neck, a notable distinction given the generally conserved molecular profiles across squamous cell carcinomas from different organs, and high PSMB8 expression predicted a better response to carfilzomib. These findings indicate that IP-targeted therapy may be particularly effective for TETs and that PSMB8 expression could serve as a biomarker for patient selection.

Clinical experience with proteasome inhibitors in other malignancies supports the development of this strategy in TETs. Bortezomib, a reversible CP/IP inhibitor, improved response rates and survival in multiple myeloma and paved the way for second-generation inhibitors (93). The irreversible inhibitor carfilzomib displays improved tolerability and activity in myeloma (93). In the phase III trial, adding carfilzomib to lenalidomide and dexamethasone extended median PFS from 17.6 to 26.3 months compared with lenalidomide/dexamethasone alone (hazard ratio 0.69) (94). Beyond haematological malignancies, pre-clinical studies show that carfilzomib inhibits proliferation, invasion, and migration of hepatocellular carcinoma cells by inducing cell-cycle arrest and upregulating GADD45α (95). Together with the new data for TETs, these results suggest that proteasome inhibition, particularly targeting the IP, is a promising, biomarker-guided therapeutic avenue for TETs


Conclusions

A fundamental understanding of pathobiology is crucial in the management of TETs. Since thymomas could be associated with autoimmunogenicity, the selection of immunotherapy as an oncological management must be performed with extreme caution. Given the potential immunological role of ectopic GCs, total or ET is required in thymoma patients presenting with autoimmunogenicity. Ultimately, robotic total thymectomy offers a reasonable and minimally invasive approach for thymoma and MG patients. We believe that the extremely interesting immunological, pathological, and oncological biology should be further challenged for more appropriate management in TETs patients.


Acknowledgments

None.


Footnote

Reporting Checklist: The authors have completed the Narrative Review reporting checklist. Available at https://med.amegroups.com/article/view/10.21037/med-2025-1-72/rc

Peer Review File: Available at https://med.amegroups.com/article/view/10.21037/med-2025-1-72/prf

Funding: This work was supported by Grants-in-Aid for Scientific Research from the Japan Society for the Promotion of Science (Nos. 16K10705 and 23K19546), and a Uehara Memorial Foundation Research Fellowship, 2021 (to S.O.).

Conflicts of Interest: All authors have completed the ICMJE uniform disclosure form (available at https://med.amegroups.com/article/view/10.21037/med-2025-1-72/coif). The authors have no conflicts of interest to declare.

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doi: 10.21037/med-2025-1-72
Cite this article as: Okada S, Ishihara S, Furuya T, Nakazono C, Inoue M. Pathobiology of thymic epithelial tumours and the treatment strategy based on immuno-oncological characteristics: a narrative review. Mediastinum 2026;10:17.

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